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HSPD1

heat shock protein family D (Hsp60) member 1

Chromosome 2q33.1 HGNC:5261 Tier C
HSPD1 2q33.1 p arm q arm 2

HSPD1 is located on the long (q) arm of chromosome 2, at band 2q33.1. Arm ratio per GRCh38 - banding schematic.

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Overview

HSPD1 (heat shock protein family D member 1) is located on chromosome 2 and encodes a member of the heat shock protein 60 family. These molecular chaperones play fundamental roles in cellular protein quality control, particularly within mitochondria where they assist in the proper folding of newly imported proteins. The Hsp60 protein functions as part of a complex system that prevents protein aggregation and maintains cellular homeostasis. Variations in HSPD1 can affect mitochondrial protein handling, though the clinical spectrum associated with this gene remains under investigation.

What the gene does

The HSPD1 protein functions as a molecular chaperone within the mitochondrial matrix, where it assists in the folding and assembly of proteins imported from the cytoplasm. Following translation in the cytosol, many mitochondrial proteins are transported across mitochondrial membranes in an unfolded state and require chaperone assistance to achieve their functional conformation. Hsp60 typically operates in conjunction with its co-chaperone Hsp10, forming a barrel-shaped complex that provides an isolated environment for protein folding. This system uses ATP hydrolysis to drive conformational changes that facilitate proper protein structure. The chaperone activity of Hsp60 is particularly important during cellular stress, when protein misfolding risks increase. By preventing aggregation of misfolded proteins and promoting correct assembly of multi-subunit enzyme complexes, HSPD1 supports mitochondrial respiratory chain function and overall cellular metabolism.

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Chromosome location

HSPD1 is positioned on the long arm of chromosome 2 at band 2q33.1. This chromosomal region contains numerous genes involved in fundamental cellular processes. The precise exon structure and transcript variants of HSPD1 contribute to its expression patterns across different tissues, with particularly high expression in metabolically active cells that depend heavily on mitochondrial function.

Protein structure

Domain architecture has not been experimentally characterised in detail for this protein.

Key variants

Genetic variants in HSPD1 can alter the chaperone function of the Hsp60 protein, potentially affecting mitochondrial protein folding capacity. Changes that reduce chaperone efficiency may compromise the stability of mitochondrial enzyme complexes. The clinical significance of individual variants depends on their location within the gene and their impact on protein structure and function.

The table below shows the top 3 pathogenic or likely-pathogenic variants currently classified in ClinVar for HSPD1.
View all on ClinVar →

Sample of pathogenic variants

3 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.

Variant (HGVS) Protein change Classification Evidence Associated condition
c.292G>A
single nucleotide variant
p.Val98Ile Pathogenic/Likely pathogenic ★★☆☆ HSPD1-related disorders
c.86A>G
single nucleotide variant
p.Asp29Gly Pathogenic ★☆☆☆ Leukodystrophy
c.1381C>G
single nucleotide variant
p.Gln461Glu Pathogenic - Hereditary spastic paraplegia 13

Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.

Associated conditions

Whilst HSPD1 variants have been identified in research studies examining mitochondrial dysfunction, no specific inherited conditions are currently definitively linked to this gene in major clinical databases. The role of HSPD1 in human disease continues to be clarified through ongoing genetic and biochemical investigations. Mitochondrial chaperonopathies represent an emerging area of clinical genetics research.

No disease links recorded for this gene in our reference set.

UK clinical status

Frequently asked questions

What does the HSPD1 gene do?

HSPD1 provides instructions for making Hsp60, a chaperone protein that helps other proteins fold correctly inside mitochondria. This folding assistance is essential for maintaining mitochondrial function and cellular energy production.

Where is HSPD1 expressed in the body?

HSPD1 is expressed in most tissues throughout the body, with particularly high levels in metabolically active organs such as the heart, brain, liver, and skeletal muscle that rely heavily on mitochondrial energy production.

How do HSPD1 variants affect health?

The clinical effects of HSPD1 variants are still being investigated. Changes that impair Hsp60 chaperone function could theoretically affect mitochondrial protein stability, though specific disease associations remain under research.

Educational content. This page is not medical or genetic advice, is not individually reviewed by a clinician for each reader, and should not replace a consultation with a qualified healthcare professional or genetic counsellor. If you are considering genetic testing or acting on a test result, book a consultation.
Data sources Last updated 17 April 2026. Content compiled from HGNC · MedlinePlus Genetics · ClinGen · Genomics England PanelApp · NHS National Genomic Test Directory · ClinVar · UniProt · AlphaFold .