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EIF2B2
eukaryotic translation initiation factor 2B subunit beta
The EIF2B2 gene provides instructions for producing a component of the eIF2B protein, which is critical for regulating overall protein production within cells. EIF2B2 is responsible for encoding the beta subunit of the eukaryotic translation initiation factor 2B (eIF2B) protein complex.
EIF2B2 is located on the long (q) arm of chromosome 14, at band 14q24.3. Arm ratio per GRCh38 - banding schematic.
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Overview
The EIF2B2 gene codes for one of the five subunits of the eukaryotic translation initiation factor 2B (eIF2B) protein. This protein complex acts as a critical regulator of protein synthesis in human cells.
Maintaining appropriate levels of protein synthesis is essential for cellular function, allowing cells to adapt to varying conditions, such as growth or rest. Impaired eIF2B function can disrupt this delicate balance, leading to health issues.
What the gene does
The EIF2B2 gene specifically directs the production of the beta subunit of the eIF2B protein. The eIF2B complex helps control the initiation phase of protein synthesis, a process where genetic information is translated into proteins.
It achieves this by interacting with another protein, eIF2. Under specific cellular conditions, eIF2B promotes protein synthesis by recycling molecules called GTP, which provide energy for the initiation factor. Conversely, eIF2B can slow protein synthesis by tightly binding to eIF2, rendering eIF2B inactive and preventing GTP recycling. This precise regulation ensures cells produce proteins at the correct rate to meet their changing demands.
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Chromosome location
The EIF2B2 gene is situated on the long arm of chromosome 14, at position 14q24.3. This specific genomic location helps define where the gene is found within the human genome.
Protein structure
The EIF2B2 gene encodes a protein consisting of 351 amino acids. Domain architecture has not been experimentally characterised in detail for this protein.
Key variants
Genetic variations within the EIF2B2 gene can influence its function. These variations range from single nucleotide changes to larger alterations, potentially affecting the production or activity of the eIF2B beta subunit. Understanding these genetic changes is important for investigating their impact on cellular processes.
Sample of pathogenic variants
10 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.
| Variant (HGVS) | Protein change | Classification | Evidence | Associated condition |
|---|---|---|---|---|
c.254T>A | p.Val85Glu | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.3G>T | p.Met1Ile | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.512C>T | p.Ser171Phe | Pathogenic/Likely pathogenic | ★★☆☆ | Vanishing white matter disease |
c.570del | p.Ile190fs | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.599G>T | p.Gly200Val | Pathogenic/Likely pathogenic | ★★☆☆ | EIF2B2-related disorder |
c.607_612delinsTG | p.Met203fs | Pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 1 |
c.818A>G | p.Lys273Arg | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.871C>T | p.Pro291Ser | Pathogenic | ★★☆☆ | Vanishing white matter disease |
c.910G>T | p.Glu304Ter | Pathogenic/Likely pathogenic | ★★☆☆ | Vanishing white matter disease |
c.922G>A | p.Val308Met | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.
Associated conditions
Variants in the EIF2B2 gene are associated with leukoencephalopathy with vanishing white matter. Some affected individuals may experience an ovarian failure variant of this condition, known as ovarioleukodystrophy, which includes neurological features alongside ovarian dysfunction. These genetic changes are thought to result in a partial loss of eIF2B function.
No disease links recorded for this gene in our reference set.
UK clinical status
The EIF2B2 gene is included in several NHS England Genomic Medicine Service national test panels. These panels cover conditions such as Ataxia and cerebellar anomalies - childhood onset, Bilateral congenital or childhood onset cataracts, Early onset or syndromic epilepsy, Foetal anomalies, Hereditary ataxia, Hereditary ataxia, adult onset, Inherited white matter disorders, Leukodystrophy, adult onset, Neurodegenerative disorders, adult onset, and White matter disorders and cerebral calcification - childhood onset, indicating its recognised clinical importance within the UK.
Sources: NHS GMS PanelApp · Genomics England PanelApp · NHS National Genomic Test Directory
Frequently asked questions
What is the primary function of the EIF2B2 gene?
The EIF2B2 gene provides instructions for making the beta subunit of the eIF2B protein, which is crucial for regulating the initiation phase of protein synthesis in cells.
What health conditions are associated with EIF2B2 gene variants?
Variants in the EIF2B2 gene are primarily associated with leukoencephalopathy with vanishing white matter, and in some cases, ovarioleukodystrophy.
Where is the EIF2B2 gene located?
The EIF2B2 gene is located on chromosome 14, specifically at position 14q24.3.
References
- Fogli A, Boespflug-Tanguy O. The large spectrum of eIF2B-related diseases. Biochemical Society transactions. 2006. PMID: 16246171
- Scheper GC, Proud CG, van der Knaap MS. Defective translation initiation causes vanishing of cerebral white matter. Trends in molecular medicine. 2006. PMID: 16545608
- Pronk JC, van Kollenburg B, Scheper GC. Vanishing white matter disease: a review with focus on its genetics. Mental retardation and developmental disabilities research reviews. 2006. PMID: 16807905
- van Kollenburg B, van Dijk J, Garbern J. Glia-specific activation of all pathways of the unfolded protein response in vanishing white matter disease. Journal of neuropathology and experimental neurology. 2006. PMID: 16825957
- Scali O, Di Perri C, Federico A. The spectrum of mutations for the diagnosis of vanishing white matter disease. Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology. 2006. PMID: 16998732
- Dietrich J, Lacagnina M, Gass D. EIF2B5 mutations compromise GFAP+ astrocyte generation in vanishing white matter leukodystrophy. Nature medicine. 2005. PMID: 15723074
- van der Voorn JP, van Kollenburg B, Bertrand G. The unfolded protein response in vanishing white matter disease. Journal of neuropathology and experimental neurology. 2005. PMID: 16141786
- Pavitt GD. eIF2B, a mediator of general and gene-specific translational control. Biochemical Society transactions. 2005. PMID: 16246152
- Fogli A, Schiffmann R, Hugendubler L. Decreased guanine nucleotide exchange factor activity in eIF2B-mutated patients. European journal of human genetics : EJHG. 2004. PMID: 15054402
- Li W, Wang X, Van Der Knaap MS. Mutations linked to leukoencephalopathy with vanishing white matter impair the function of the eukaryotic initiation factor 2B complex in diverse ways. Molecular and cellular biology. 2004. PMID: 15060152