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EIF2B2
eukaryotic translation initiation factor 2B subunit beta
The EIF2B2 gene provides instructions for a subunit of the eukaryotic translation initiation factor 2B (eIF2B) protein, which is crucial for regulating protein production within cells. EIF2B2 encodes the beta subunit of the eIF2B protein, a complex that plays a central role in controlling how and when proteins are made.
EIF2B2 is located on the long (q) arm of chromosome 14, at band 14q24.3. Arm ratio per GRCh38 - banding schematic.
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Overview
The EIF2B2 gene is responsible for producing one of the five subunits (specifically, the beta subunit) that make up the eukaryotic translation initiation factor 2B (eIF2B) protein. This eIF2B protein complex is a key regulator of overall protein synthesis, a fundamental cellular process where genetic information is translated into functional proteins.
Maintaining the correct balance of protein production is critical for cell health and function, allowing cells to respond to varying demands, such as growth or stress. Dysregulation of this process, often due to variants in genes like EIF2B2, can lead to various health conditions.
What the gene does
The EIF2B2 gene's primary role is to provide instructions for the beta subunit of the eIF2B protein. The eIF2B complex acts to recycle specific molecules essential for starting protein synthesis. This recycling involves another protein called eIF2, which initiates protein production. The eIF2B protein helps facilitate the reuse of energy-carrying GTP molecules, which are vital for this initiation step.
Depending on the cell's needs, eIF2B can either enhance protein synthesis by promoting GTP recycling or slow it down. It achieves this by binding tightly to eIF2, which renders eIF2B inactive and prevents GTP from being recycled. This regulatory mechanism allows cells to finely tune their protein production rates to adapt to different physiological states, such as rapid cell multiplication or a resting state.
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Chromosome location
The EIF2B2 gene is located on chromosome 14, specifically at position 14q24.3. This genomic address specifies its precise placement on the long arm (q arm) of chromosome 14.
Protein structure
Domain architecture has not been experimentally characterised in detail for this protein.
Key variants
Variants within the EIF2B2 gene can alter the protein's structure and function, potentially disrupting its role in regulating protein synthesis. These genetic changes may lead to a partial loss of eIF2B function, impacting the cell's ability to produce proteins efficiently or adapt to stress. The clinical significance of EIF2B2 variants is assessed based on their impact on protein function and association with observed health conditions.
Sample of pathogenic variants
10 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.
| Variant (HGVS) | Protein change | Classification | Evidence | Associated condition |
|---|---|---|---|---|
c.254T>A | p.Val85Glu | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.3G>T | p.Met1Ile | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.512C>T | p.Ser171Phe | Pathogenic/Likely pathogenic | ★★☆☆ | Vanishing white matter disease |
c.514C>T | p.Arg172Ter | Pathogenic/Likely pathogenic | ★★☆☆ | EIF2B2-related disorders |
c.570del | p.Ile190fs | Pathogenic/Likely pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 2 |
c.599G>T | p.Gly200Val | Pathogenic/Likely pathogenic | ★★☆☆ | EIF2B2-related disorder |
c.607_612delinsTG | p.Met203fs | Pathogenic | ★★☆☆ | Leukoencephalopathy with vanishing white matter 1 |
c.607del | p.Met203fs | Pathogenic/Likely pathogenic | ★★☆☆ | EIF2B2-related disorder |
c.818A>G | p.Lys273Arg | Pathogenic/Likely pathogenic | ★★☆☆ | EIF2B2-related disorder |
c.871C>T | p.Pro291Ser | Pathogenic | ★★☆☆ | Vanishing white matter disease |
Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.
Associated conditions
Variants in the EIF2B2 gene have been identified in a few individuals with leukoencephalopathy with vanishing white matter. This condition is characterised by neurological features. In some affected females, it can also be accompanied by ovarian failure, a presentation known as ovarioleukodystrophy. The underlying mechanism involves a reduced function of the eIF2B protein, which impairs the body's response to stress.
No disease links recorded for this gene in our reference set.
UK clinical status
The EIF2B2 gene is included in several NHS England Genomic Medicine Service approved panels. These include panels for "Ataxia and cerebellar anomalies - childhood onset", "Bilateral congenital or childhood onset cataracts (R31)", "Early onset or syndromic epilepsy", "Foetal anomalies (R21)", "Hereditary ataxia", "Hereditary ataxia, adult onset", "Inherited white matter disorders", "Leukodystrophy, adult onset (R62)", "Neurodegenerative disorders, adult onset", and "White matter disorders and cerebral calcification - childhood onset". This indicates its recognised clinical relevance within the UK healthcare system for diagnosing these conditions.
Sources: NHS GMS PanelApp · Genomics England PanelApp · NHS National Genomic Test Directory
Frequently asked questions
What is the EIF2B2 gene?
The EIF2B2 gene provides instructions for making the beta subunit of the eukaryotic translation initiation factor 2B (eIF2B) protein. This protein complex is vital for regulating the production of proteins within cells.
What conditions are associated with EIF2B2 gene variants?
Variants in the EIF2B2 gene are primarily associated with leukoencephalopathy with vanishing white matter. Some affected individuals, particularly females, may also experience ovarian failure, a condition referred to as ovarioleukodystrophy.
How does the EIF2B2 protein function in the body?
The EIF2B2 protein, as part of the eIF2B complex, helps regulate protein synthesis by recycling energy-carrying molecules (GTP) for another protein, eIF2. This enables cells to adjust their protein production rates as needed, responding to different physiological states.
References
- Fogli A, Boespflug-Tanguy O. The large spectrum of eIF2B-related diseases. Biochemical Society transactions. 2006. PMID: 16246171
- Scheper GC, Proud CG, van der Knaap MS. Defective translation initiation causes vanishing of cerebral white matter. Trends in molecular medicine. 2006. PMID: 16545608
- Pronk JC, van Kollenburg B, Scheper GC. Vanishing white matter disease: a review with focus on its genetics. Mental retardation and developmental disabilities research reviews. 2006. PMID: 16807905
- van Kollenburg B, van Dijk J, Garbern J. Glia-specific activation of all pathways of the unfolded protein response in vanishing white matter disease. Journal of neuropathology and experimental neurology. 2006. PMID: 16825957
- Scali O, Di Perri C, Federico A. The spectrum of mutations for the diagnosis of vanishing white matter disease. Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology. 2006. PMID: 16998732
- Dietrich J, Lacagnina M, Gass D. EIF2B5 mutations compromise GFAP+ astrocyte generation in vanishing white matter leukodystrophy. Nature medicine. 2005. PMID: 15723074
- van der Voorn JP, van Kollenburg B, Bertrand G. The unfolded protein response in vanishing white matter disease. Journal of neuropathology and experimental neurology. 2005. PMID: 16141786
- Pavitt GD. eIF2B, a mediator of general and gene-specific translational control. Biochemical Society transactions. 2005. PMID: 16246152
- Fogli A, Schiffmann R, Hugendubler L. Decreased guanine nucleotide exchange factor activity in eIF2B-mutated patients. European journal of human genetics : EJHG. 2004. PMID: 15054402
- Li W, Wang X, Van Der Knaap MS. Mutations linked to leukoencephalopathy with vanishing white matter impair the function of the eukaryotic initiation factor 2B complex in diverse ways. Molecular and cellular biology. 2004. PMID: 15060152