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GALE
UDP-galactose-4-epimerase
The GALE gene provides instructions for the UDP-galactose-4-epimerase enzyme, which is critical for the body's proper metabolism of galactose, a simple sugar. The GALE gene is responsible for producing an enzyme called UDP-galactose-4-epimerase.
GALE is located on the short (p) arm of chromosome 1, at band 1p36.11. Arm ratio per GRCh38 - banding schematic.
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Clinical tests that include this
Overview
The GALE gene encodes the enzyme UDP-galactose-4-epimerase, which is fundamental to the body's ability to process galactose. Galactose is a simple sugar found in many foods, often as part of lactose in dairy products.
This enzyme facilitates the interconversion of UDP-galactose and UDP-glucose, which are crucial for energy production and the creation of essential cellular components. Defects in this enzyme's function can lead to metabolic disorders.
What the gene does
The UDP-galactose-4-epimerase enzyme, encoded by the GALE gene, has a dual role in carbohydrate metabolism. It converts UDP-galactose to UDP-glucose, a process that enables the body to utilise galactose for energy by converting it into glucose.
Conversely, the enzyme also catalyses the reverse reaction, converting UDP-glucose back to UDP-galactose. This UDP-galactose is then used as a building block for various galactose-containing proteins and fats. These complex molecules are integral to chemical signalling, forming cellular structures, facilitating molecular transport, and contributing to overall energy production within cells.
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Chromosome location
The GALE gene is situated on chromosome 1, specifically at position 1p36.11. This precise location specifies the gene's address within the human genome.
Protein structure
Domain architecture has not been experimentally characterised in detail for this protein.
Key variants
Variants in the GALE gene can alter the function of the UDP-galactose-4-epimerase enzyme, potentially impacting the body's ability to metabolise galactose effectively. More than 20 different genetic changes in GALE have been identified, primarily affecting single amino acids in the enzyme structure.
Sample of pathogenic variants
10 pathogenic / likely-pathogenic variants from ClinVar, ranked by review status (expert-panel-reviewed first). This is a sample; recurrent founder variants in a specific population may not appear here - see the full ClinVar listing via the link above.
| Variant (HGVS) | Protein change | Classification | Evidence | Associated condition |
|---|---|---|---|---|
c.142_143del | p.Ser48fs | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.151_154del | p.Arg51fs | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.2T>C | p.Met1Thr | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.315_316del | p.Tyr105_Arg106delinsTer | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.449C>T | p.Thr150Met | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.505C>T | p.Arg169Trp | Pathogenic/Likely pathogenic | ★★☆☆ | Thrombocytopenia 13, syndromic |
c.517del | p.Gln173fs | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.715C>T | p.Arg239Trp | Pathogenic/Likely pathogenic | ★★☆☆ | Thrombocytopenia 13, syndromic |
c.749del | p.Gly250fs | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
c.796-1G>T | - | Pathogenic/Likely pathogenic | ★★☆☆ | UDPglucose-4-epimerase deficiency |
Evidence stars indicate ClinVar review status. Individual variant interpretation should always be performed by a qualified clinical laboratory - many variants remain classified as Variants of Uncertain Significance (VUS) pending more research.
Associated conditions
Pathogenic variants in the GALE gene are associated with galactosaemia type III, also known as galactose epimerase deficiency. This inherited metabolic condition typically manifests shortly after birth, though its severity can vary considerably between affected individuals.
No disease links recorded for this gene in our reference set.
Inheritance pattern
Conditions caused by pathogenic GALE variants typically follow autosomal recessive inheritance.
When both parents are carriers, each child has a 25% chance of being affected, 50% of being a carrier, and 25% of being unaffected.
UK clinical status
The GALE gene is included on several NHS Genomic Medicine Service national panels. It is listed with a 'green' status for conditions such as Cholestasis, Foetal anomalies, Intellectual disability, Likely inborn error of metabolism, Neonatal cholestasis, and Undiagnosed metabolic disorders, indicating its established role in these conditions within the NHS framework.
Sources: NHS GMS PanelApp · Genomics England PanelApp · NHS National Genomic Test Directory
Frequently asked questions
What is the main function of the GALE gene?
The GALE gene provides instructions for making the UDP-galactose-4-epimerase enzyme, which is essential for converting galactose into glucose and synthesising galactose-containing molecules vital for cell function.
What condition is associated with GALE gene variants?
Variants in the GALE gene are linked to galactosaemia type III, also known as galactose epimerase deficiency, an inherited metabolic disorder that affects the body's ability to process galactose.
Where is the GALE gene located?
The GALE gene is located on chromosome 1 at position 1p36.11 within the human genome.
References
- Pey AL, Padín-Gonzalez E, Mesa-Torres N. The metastability of human UDP-galactose 4'-epimerase (GALE) is increased by variants associated with type III galactosemia but decreased by substrate and cofactor binding. Archives of biochemistry and biophysics. 2014. PMID: 25150110
- Timson DJ, Lindert S. Comparison of dynamics of wildtype and V94M human UDP-galactose 4-epimerase-A computational perspective on severe epimerase-deficiency galactosemia. Gene. 2013. PMID: 23732289
- Timson DJ. The structural and molecular biology of type III galactosemia. IUBMB life. 2006. PMID: 16611573
- Timson DJ. Functional analysis of disease-causing mutations in human UDP-galactose 4-epimerase. The FEBS journal. 2005. PMID: 16302980
- Schulz JM, Watson AL, Sanders R. Determinants of function and substrate specificity in human UDP-galactose 4'-epimerase. The Journal of biological chemistry. 2004. PMID: 15175331
- Adam MP, Bick S, Mirzaa GM. Epimerase Deficiency Galactosemia. 1993. PMID: 21290786